Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan peptidase | BKM63_14695 | Not Available | Negative | 3401556 - 3402236 | 25906.2 |
| hypothetical protein | BKM63_14700 | Not Available | Negative | 3402346 - 3403251 | 33978.1 |
| 3-deoxy-8-phosphooctulonate synthase | BKM63_14705 | Not Available | Negative | 3403271 - 3404089 | 29905.1 |
| hypothetical protein | BKM63_14710 | Not Available | Negative | 3404275 - 3404619 | 13055.5 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | BKM63_14715 | Not Available | Negative | 3404647 - 3405099 | 17087.8 |
| hypothetical protein | BKM63_14720 | Not Available | Negative | 3405216 - 3405896 | 25760.2 |
| sterol desaturase | BKM63_14725 | Not Available | Negative | 3405896 - 3407176 | 49271.1 |
| hypothetical protein | BKM63_14730 | Not Available | Negative | 3407293 - 3408810 | 58602.2 |
| clp protease clps | BKM63_14735 | Not Available | Negative | 3408895 - 3409170 | 10311.3 |
| ribosomal protein l11 methyltransferase | BKM63_14740 | Not Available | Negative | 3409208 - 3410041 | 31792.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
