Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | BKM63_14645 | Not Available | Positive | 3387236 - 3390244 | 109472.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_14650 | Not Available | Positive | 3390249 - 3391712 | 53329.7 |
| beta-glucosidase | BKM63_14655 | Not Available | Positive | 3391783 - 3393156 | 51370.2 |
| phospholipase | BKM63_14660 | Not Available | Positive | 3393163 - 3393876 | 27052.7 |
| beta-glucosidase | BKM63_14665 | Not Available | Positive | 3393887 - 3396187 | 83960.8 |
| glycerophosphodiester phosphodiesterase | BKM63_14670 | Not Available | Positive | 3396279 - 3397064 | 30216.3 |
| xylosidase | BKM63_14675 | Not Available | Positive | 3397096 - 3399015 | 73360.3 |
| peptidase m28 family protein | BKM63_14680 | Not Available | Positive | 3399182 - 3400573 | 50717.6 |
| hypothetical protein | BKM63_14685 | Not Available | Negative | 3400703 - 3401008 | 11828.9 |
| hypothetical protein | BKM63_14690 | Not Available | Negative | 3401014 - 3401466 | 18060.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
