Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminotransferase | BKM63_01385 | Not Available | Positive | 299806 - 300933 | 42671.3 |
| short-chain dehydrogenase | BKM63_01390 | Not Available | Positive | 301008 - 301889 | 31844.4 |
| uridine kinase | BKM63_01395 | Not Available | Positive | 302157 - 302765 | 23156.7 |
| hypothetical protein | BKM63_01400 | Not Available | Negative | 302746 - 302928 | 7300.49 |
| septum formation initiator | BKM63_01405 | Not Available | Positive | 302910 - 303242 | 13876.6 |
| methylmalonyl-coa mutase | BKM63_01410 | Not Available | Positive | 303259 - 304623 | 52161.2 |
| methylmalonyl-coa mutase | BKM63_01415 | Not Available | Positive | 304665 - 306818 | 79851.6 |
| peptidoglycan-binding protein lysm | BKM63_01420 | Not Available | Negative | 306863 - 307510 | 24570.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 308828 - 308937 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 309094 - 311985 | Not Available |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
