Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase 43 family protein | BKM63_14290 | Not Available | Positive | 3294304 - 3295878 | 58811.4 |
| glycoside hydrolase family 2 | BKM63_14295 | Not Available | Positive | 3295881 - 3297683 | 69086.8 |
| hypothetical protein | BKM63_14300 | Not Available | Positive | 3297878 - 3298606 | 27214.3 |
| hybrid sensor histidine kinase/response regulator | BKM63_14305 | Not Available | Negative | 3298729 - 3302736 | 152843.0 |
| hypothetical protein | BKM63_14310 | Not Available | Negative | 3302871 - 3304820 | 72522.9 |
| beta-galactosidase | BKM63_14315 | Not Available | Negative | 3304918 - 3307005 | 79479.4 |
| alpha-xylosidase | BKM63_14320 | Not Available | Negative | 3307090 - 3309951 | 109519.0 |
| xylosidase | BKM63_14325 | Not Available | Positive | 3310472 - 3312868 | 91902.5 |
| l-fucose mutarotase | BKM63_14330 | Not Available | Positive | 3312879 - 3313229 | 13785.7 |
| hypothetical protein | BKM63_14335 | Not Available | Negative | 3314171 - 3314764 | 22289.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
