Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-(glutamine-n5) methyltransferase, release factor-specific | BKM63_01335 | Not Available | Negative | 291629 - 292489 | 33200.9 |
| hypothetical protein | BKM63_01340 | Not Available | Negative | 292527 - 293333 | 30553.2 |
| gnat family n-acetyltransferase | BKM63_01345 | Not Available | Negative | 293338 - 293823 | 18528.7 |
| riboflavin biosynthesis protein ribd | BKM63_01350 | Not Available | Positive | 293951 - 295000 | 39638.5 |
| haloacid dehalogenase | BKM63_01355 | Not Available | Positive | 294993 - 295595 | 22932.2 |
| yigz family protein | BKM63_01360 | Not Available | Positive | 295809 - 296441 | 23781.7 |
| thioesterase | BKM63_01365 | Not Available | Negative | 296473 - 296877 | 15539.8 |
| chromosomal replication initiation protein dnaa | BKM63_01370 | Not Available | Positive | 297064 - 298491 | 54508.6 |
| protein-tyrosine-phosphatase | BKM63_01375 | Not Available | Positive | 298499 - 298966 | 17267.6 |
| sam-dependent methyltransferase | BKM63_01380 | Not Available | Positive | 299038 - 299751 | 26765.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
