Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osta-like protein | BKM63_13925 | Not Available | Negative | 3201952 - 3203622 | 63109.3 |
| alpha-amylase | BKM63_13930 | Not Available | Positive | 3203909 - 3205780 | 71195.7 |
| superoxide dismutase | BKM63_13935 | Not Available | Negative | 3205842 - 3206624 | 29897.7 |
| phosphatidylserine decarboxylase | BKM63_13940 | Not Available | Negative | 3206634 - 3206903 | 10261.1 |
| phosphatidylserine decarboxylase | BKM63_13945 | Not Available | Negative | 3206904 - 3207557 | 24253.0 |
| phosphatidate cytidylyltransferase | BKM63_13950 | Not Available | Negative | 3207547 - 3208437 | 33135.3 |
| lactate utilization protein b/c | BKM63_13955 | Not Available | Negative | 3208439 - 3209044 | 23011.1 |
| peptidase m41 | BKM63_13960 | Not Available | Negative | 3209161 - 3211086 | 70822.3 |
| ribosome silencing factor | BKM63_13965 | Not Available | Negative | 3211104 - 3211475 | 14081.8 |
| biotin--[acetyl-coa-carboxylase] ligase | BKM63_13970 | Not Available | Positive | 3211568 - 3212296 | 27253.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
