Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | BKM63_13820 | Not Available | Negative | 3173805 - 3174725 | 32768.5 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | BKM63_13825 | Not Available | Negative | 3174877 - 3177324 | 89691.7 |
| hypothetical protein | BKM63_13830 | Not Available | Negative | 3177430 - 3177615 | 6989.35 |
| histidine ammonia-lyase | BKM63_13835 | Not Available | Positive | 3177967 - 3179481 | 55883.2 |
| phosphate transport regulator | BKM63_13840 | Not Available | Positive | 3179530 - 3180174 | 24614.5 |
| inorganic phosphate transporter | BKM63_13845 | Not Available | Positive | 3180205 - 3181545 | 48079.4 |
| smi1/knr4 family protein | BKM63_13850 | Not Available | Positive | 3181692 - 3183059 | 53201.9 |
| peptidase | BKM63_13855 | Not Available | Negative | 3183127 - 3184446 | 49227.9 |
| hypothetical protein | BKM63_13860 | Not Available | Negative | 3184443 - 3185060 | 24002.6 |
| padr family transcriptional regulator | BKM63_13865 | Not Available | Negative | 3185057 - 3185392 | 13178.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
