Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate:quinone oxidoreductase | BKM63_13565 | Not Available | Positive | 3123365 - 3124858 | 55363.9 |
| cysteine hydrolase | BKM63_13570 | Not Available | Positive | 3124943 - 3125515 | 20985.7 |
| hypothetical protein | BKM63_13575 | Not Available | Negative | 3125543 - 3127765 | 84401.5 |
| peptide deformylase | BKM63_13580 | Not Available | Positive | 3127967 - 3128557 | 22411.0 |
| hypothetical protein | BKM63_13585 | Not Available | Positive | 3128621 - 3129106 | 17791.4 |
| nucleoside triphosphate pyrophosphohydrolase | BKM63_13590 | Not Available | Positive | 3129210 - 3129980 | 29854.7 |
| crp/fnr family transcriptional regulator | BKM63_13595 | Not Available | Negative | 3129982 - 3130662 | 25147.7 |
| atpase | BKM63_13600 | Not Available | Positive | 3130864 - 3133251 | 89769.0 |
| cytochrome oxidase maturation protein, cbb3-type | BKM63_13605 | Not Available | Positive | 3133366 - 3133557 | 7155.59 |
| cytochrome c oxidase cbb3 | BKM63_13610 | Not Available | Positive | 3133561 - 3135747 | 82800.7 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
