Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_13515 | Not Available | Positive | 3114101 - 3115066 | 37502.9 |
| hypothetical protein | BKM63_13520 | Not Available | Negative | 3115063 - 3116085 | 38669.4 |
| hypothetical protein | BKM63_13525 | Not Available | Positive | 3116205 - 3117062 | 34364.6 |
| glycosyl transferase family 1 | BKM63_13530 | Not Available | Negative | 3117075 - 3118148 | 41333.1 |
| kdo domain containing protein | BKM63_13535 | Not Available | Positive | 3118233 - 3119000 | 30255.3 |
| glycosyl transferase | BKM63_13540 | Not Available | Negative | 3118997 - 3119767 | 29909.0 |
| adp-heptose--lps heptosyltransferase | BKM63_13545 | Not Available | Negative | 3119772 - 3120836 | 40832.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | BKM63_13550 | Not Available | Negative | 3120942 - 3121757 | 29310.5 |
| histidine kinase | BKM63_13555 | Not Available | Positive | 3122042 - 3122674 | 24787.5 |
| holliday junction dna helicase ruva | BKM63_13560 | Not Available | Positive | 3122823 - 3123239 | 15578.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
