Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine transaminase | BKM63_13260 | Not Available | Negative | 3061747 - 3062817 | 39006.8 |
| acyl-coa reductase | BKM63_13265 | Not Available | Negative | 3062911 - 3063984 | 41244.5 |
| ferredoxin | BKM63_13270 | Not Available | Positive | 3064134 - 3064487 | 12760.6 |
| hypothetical protein | BKM63_13275 | Not Available | Positive | 3064651 - 3065808 | 44803.6 |
| redox-regulated atpase ychf | BKM63_13280 | Not Available | Positive | 3066249 - 3067343 | 40274.2 |
| hypothetical protein | BKM63_13285 | Not Available | Negative | 3067524 - 3067733 | 7509.11 |
| urease-associated protein | BKM63_13290 | Not Available | Positive | 3067814 - 3068491 | 25684.5 |
| hypothetical protein | BKM63_13295 | Not Available | Positive | 3068500 - 3069171 | 26527.8 |
| ribonuclease bn | BKM63_13300 | Not Available | Positive | 3069286 - 3070194 | 33481.5 |
| nadph-dependent fmn reductase | BKM63_13305 | Not Available | Positive | 3070270 - 3070794 | 19340.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
