Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase, copper-containing | BKM63_13055 | Not Available | Negative | 3012257 - 3013696 | 52092.6 |
| 8-amino-7-oxononanoate synthase | BKM63_13060 | Not Available | Positive | 3013957 - 3015216 | 46633.3 |
| hypothetical protein | BKM63_13065 | Not Available | Positive | 3015337 - 3015822 | 17820.2 |
| gtp cyclohydrolase | BKM63_13070 | Not Available | Negative | 3015935 - 3017053 | 43767.9 |
| hypothetical protein | BKM63_13075 | Not Available | Negative | 3017098 - 3018069 | 37001.7 |
| duf4834 domain-containing protein | BKM63_13080 | Not Available | Positive | 3018194 - 3018481 | 11292.4 |
| hypothetical protein | BKM63_13085 | Not Available | Positive | 3018533 - 3020980 | 91848.5 |
| hypothetical protein | BKM63_13090 | Not Available | Positive | 3020988 - 3021233 | 9947.34 |
| hypothetical protein | BKM63_13095 | Not Available | Positive | 3021251 - 3021430 | 7027.73 |
| glycosyl transferase family 1 | BKM63_13100 | Not Available | Positive | 3021449 - 3022738 | 49038.4 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
