Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | BKM63_12800 | Not Available | Positive | 2944415 - 2946514 | 77081.5 |
| osmotically inducible protein osmc | BKM63_12805 | Not Available | Positive | 2946514 - 2946915 | 14503.4 |
| glycosyl hydrolase | BKM63_12810 | Not Available | Negative | 2946997 - 2948373 | 51407.2 |
| peptidase m1 | BKM63_12815 | Not Available | Negative | 2948552 - 2950738 | 83713.0 |
| duf5107 domain-containing protein | BKM63_12820 | Not Available | Negative | 2950761 - 2953856 | 118138.0 |
| hypothetical protein | BKM63_12825 | Not Available | Negative | 2954130 - 2957135 | 112472.0 |
| cytochrome c class i | BKM63_12830 | Not Available | Negative | 2957172 - 2958167 | 37358.2 |
| hypothetical protein | BKM63_12835 | Not Available | Negative | 2958234 - 2959643 | 53474.7 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_12840 | Not Available | Negative | 2959737 - 2961248 | 56642.6 |
| susc/raga family tonb-linked outer membrane protein | BKM63_12845 | Not Available | Negative | 2961285 - 2964380 | 112818.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
