Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_11995 | Not Available | Positive | 2760022 - 2760387 | 13476.2 |
| zn-dependent protease | BKM63_12000 | Not Available | Positive | 2760506 - 2761369 | 33507.5 |
| xylose isomerase | BKM63_12005 | Not Available | Positive | 2761398 - 2762270 | 32990.5 |
| cupin | BKM63_12010 | Not Available | Positive | 2762321 - 2762671 | 12869.3 |
| mfs transporter | BKM63_12015 | Not Available | Positive | 2762782 - 2763954 | 41925.7 |
| peptidylprolyl isomerase | BKM63_12020 | Not Available | Positive | 2764022 - 2764954 | 33423.8 |
| cytochrome c | BKM63_12025 | Not Available | Positive | 2765048 - 2765347 | 10791.2 |
| hypothetical protein | BKM63_12030 | Not Available | Negative | 2765456 - 2765851 | 14540.5 |
| thioredoxin family protein | BKM63_12035 | Not Available | Negative | 2766244 - 2766798 | 20776.7 |
| alpha/beta hydrolase | BKM63_12040 | Not Available | Negative | 2766977 - 2767870 | 33662.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
