Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | BKM63_11945 | Not Available | Negative | 2749372 - 2749602 | 8714.05 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase | BKM63_11950 | Not Available | Negative | 2749708 - 2750658 | 35697.6 |
| thiamine diphosphokinase | BKM63_11955 | Not Available | Negative | 2750801 - 2751463 | 24706.8 |
| dinb superfamily protein | BKM63_11960 | Not Available | Negative | 2751642 - 2752082 | 17007.6 |
| gyri-like domain-containing protein | BKM63_11965 | Not Available | Negative | 2752127 - 2752609 | 18708.0 |
| hypothetical protein | BKM63_11970 | Not Available | Negative | 2752612 - 2753439 | 30735.1 |
| collagen-binding protein | BKM63_11975 | Not Available | Negative | 2753477 - 2755858 | 89392.6 |
| isocitrate dehydrogenase (nadp(+)) | BKM63_11980 | Not Available | Negative | 2756000 - 2758222 | 80341.8 |
| 50s ribosomal protein l19 | BKM63_11985 | Not Available | Negative | 2758507 - 2758857 | 13364.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | BKM63_11990 | Not Available | Negative | 2759072 - 2759749 | 25570.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
