Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_11895 | Not Available | Negative | 2739430 - 2740230 | 30769.2 |
| hypothetical protein | BKM63_11900 | Not Available | Negative | 2740190 - 2740420 | 8981.63 |
| histidine kinase | BKM63_11905 | Not Available | Positive | 2740452 - 2741492 | 41320.1 |
| dna-binding response regulator | BKM63_11910 | Not Available | Positive | 2741496 - 2742203 | 26739.2 |
| hypothetical protein | BKM63_11915 | Not Available | Negative | 2742306 - 2742761 | 17182.9 |
| aminotransferase class i/ii | BKM63_11920 | Not Available | Negative | 2742865 - 2743899 | 38633.3 |
| dipeptide epimerase | BKM63_11925 | Not Available | Negative | 2743902 - 2744912 | 37881.0 |
| hypothetical protein | BKM63_11930 | Not Available | Negative | 2744961 - 2746190 | 47790.3 |
| excinuclease abc subunit b | BKM63_11935 | Not Available | Negative | 2746304 - 2748295 | 75790.7 |
| alpha/beta hydrolase | BKM63_11940 | Not Available | Negative | 2748343 - 2749284 | 35423.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
