Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_11840 | Not Available | Negative | 2724274 - 2725461 | 45923.7 |
| duf1572 domain-containing protein | BKM63_11850 | Not Available | Negative | 2726435 - 2726902 | 18264.7 |
| hypothetical protein | BKM63_11855 | Not Available | Negative | 2726938 - 2727495 | 20699.6 |
| hypothetical protein | BKM63_11860 | Not Available | Negative | 2727623 - 2728072 | 17015.5 |
| hypothetical protein | BKM63_11865 | Not Available | Negative | 2728114 - 2728476 | 13742.3 |
| hypothetical protein | BKM63_11870 | Not Available | Negative | 2728981 - 2729490 | 19764.7 |
| diaminopimelate decarboxylase | BKM63_11875 | Not Available | Negative | 2729857 - 2731080 | 45655.9 |
| glutamate synthase | BKM63_11880 | Not Available | Negative | 2731534 - 2732988 | 52950.2 |
| glutamate synthase subunit alpha | BKM63_11885 | Not Available | Negative | 2733083 - 2737597 | 166891.0 |
| succinate--coa ligase subunit beta | BKM63_11890 | Not Available | Positive | 2738014 - 2739207 | 43040.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
