Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s24 | BKM63_11490 | Not Available | Positive | 2635769 - 2636452 | 25908.2 |
| hybrid sensor histidine kinase/response regulator | BKM63_11495 | Not Available | Positive | 2636684 - 2640814 | 156875.0 |
| susc/raga family tonb-linked outer membrane protein | BKM63_11500 | Not Available | Positive | 2641299 - 2644325 | 111014.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_11505 | Not Available | Positive | 2644367 - 2645959 | 59883.6 |
| 1,4-beta-xylanase | BKM63_11510 | Not Available | Positive | 2646042 - 2647136 | 41145.7 |
| hypothetical protein | BKM63_11515 | Not Available | Positive | 2647338 - 2648240 | 33485.0 |
| hypothetical protein | BKM63_11520 | Not Available | Positive | 2648332 - 2649741 | 55166.2 |
| beta-glucuronidase | BKM63_11525 | Not Available | Positive | 2649929 - 2651731 | 69652.7 |
| hypothetical protein | BKM63_11530 | Not Available | Negative | 2652244 - 2653035 | 30684.8 |
| hypothetical protein | BKM63_11535 | Not Available | Negative | 2653032 - 2654144 | 43383.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
