Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpxa family transferase | BKM63_11240 | Not Available | Positive | 2555650 - 2556267 | 22786.1 |
| alpha-l-fucosidase | BKM63_11245 | Not Available | Positive | 2556751 - 2558829 | 78067.1 |
| glucosamine-6-phosphate deaminase | BKM63_11250 | Not Available | Positive | 2558970 - 2560883 | 72699.4 |
| dna-binding response regulator | BKM63_11255 | Not Available | Negative | 2561141 - 2561854 | 27442.5 |
| sensor histidine kinase | BKM63_11260 | Not Available | Negative | 2561922 - 2562980 | 41722.3 |
| alpha-mannosidase | BKM63_11265 | Not Available | Positive | 2563102 - 2565345 | 84137.7 |
| sodium:solute symporter | BKM63_11270 | Not Available | Positive | 2565395 - 2567272 | 70724.5 |
| glycosidase | BKM63_11275 | Not Available | Positive | 2567660 - 2568625 | 36382.0 |
| carbohydrate-binding family 9-like protein | BKM63_11280 | Not Available | Positive | 2568633 - 2569703 | 41843.6 |
| hypothetical protein | BKM63_11285 | Not Available | Positive | 2569710 - 2570789 | 41505.7 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
