Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | BKM63_10970 | Not Available | Negative | 2482855 - 2484234 | 52666.0 |
| dna polymerase iii subunit alpha | BKM63_10975 | Not Available | Negative | 2484267 - 2487326 | 117277.0 |
| dna polymerase iv | BKM63_10980 | Not Available | Negative | 2487326 - 2488507 | 44572.5 |
| xre family transcriptional regulator | BKM63_10985 | Not Available | Positive | 2488598 - 2489371 | 29398.4 |
| hypothetical protein | BKM63_10990 | Not Available | Positive | 2489543 - 2489767 | 8677.5 |
| hypothetical protein | BKM63_10995 | Not Available | Positive | 2489772 - 2490161 | 15406.0 |
| hypothetical protein | BKM63_11000 | Not Available | Positive | 2490165 - 2490614 | 17747.5 |
| pas domain-containing sensor histidine kinase | BKM63_11005 | Not Available | Negative | 2490692 - 2492410 | 64282.6 |
| histidine kinase | BKM63_11010 | Not Available | Negative | 2492492 - 2493616 | 42519.9 |
| hypothetical protein | BKM63_11015 | Not Available | Negative | 2493700 - 2494779 | 40673.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
