Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin grol | BKM63_10165 | Not Available | Negative | 2284917 - 2286548 | 57051.8 |
| four helix bundle protein | BKM63_10170 | Not Available | Negative | 2286592 - 2286948 | 13767.5 |
| co-chaperone groes | BKM63_10175 | Not Available | Negative | 2287034 - 2287309 | 9776.91 |
| preprotein translocase subunit secg | BKM63_10180 | Not Available | Negative | 2287449 - 2287790 | 11580.3 |
| hypothetical protein | BKM63_10185 | Not Available | Negative | 2287795 - 2289474 | 63990.7 |
| hypothetical protein | BKM63_10190 | Not Available | Negative | 2289582 - 2290091 | 19052.5 |
| sigma-54-dependent fis family transcriptional regulator | BKM63_10195 | Not Available | Negative | 2290191 - 2291447 | 47543.8 |
| hypothetical protein | BKM63_10200 | Not Available | Negative | 2291481 - 2292440 | 36449.6 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | BKM63_10205 | Not Available | Negative | 2292530 - 2293975 | 54419.2 |
| dna topoisomerase i | BKM63_10210 | Not Available | Positive | 2294344 - 2296860 | 93973.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
