Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent protease | BKM63_00940 | Not Available | Negative | 215202 - 215810 | 22768.7 |
| hypothetical protein | BKM63_00945 | Not Available | Negative | 215830 - 216009 | 6690.45 |
| signal recognition particle-docking protein ftsy | BKM63_00950 | Not Available | Negative | 216016 - 216969 | 34592.6 |
| duf4295 domain-containing protein | BKM63_00955 | Not Available | Negative | 217239 - 217391 | 5547.91 |
| 50s ribosomal protein l33 | BKM63_00960 | Not Available | Negative | 217469 - 217651 | 6918.59 |
| 50s ribosomal protein l28 | BKM63_00965 | Not Available | Negative | 217679 - 217915 | 8839.96 |
| damage-inducible protein cina | BKM63_00970 | Not Available | Negative | 217987 - 219240 | 45906.5 |
| histidine kinase | BKM63_00975 | Not Available | Negative | 219417 - 219761 | 13235.1 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | BKM63_00980 | Not Available | Negative | 219761 - 220372 | 23193.1 |
| dna polymerase iii subunit epsilon | BKM63_00985 | Not Available | Negative | 220466 - 221236 | 28990.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
