Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin binding protein transpeptidase domain-containing protein | BKM63_00055 | Not Available | Positive | 19997 - 20848 | 32878.3 |
| tonb-dependent receptor | BKM63_00060 | Not Available | Negative | 20992 - 22857 | 70663.7 |
| gntr family transcriptional regulator | BKM63_00065 | Not Available | Positive | 22924 - 24405 | 56130.8 |
| hypothetical protein | BKM63_00070 | Not Available | Positive | 24587 - 25549 | 34980.2 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 25087 - 25184 | Not Available |
| mfs transporter | BKM63_00075 | Not Available | Negative | 25664 - 26860 | 43579.7 |
| hypothetical protein | BKM63_00080 | Not Available | Negative | 26925 - 27506 | 21812.3 |
| thiol:disulfide interchange protein | BKM63_00085 | Not Available | Negative | 27827 - 29860 | 75475.1 |
| peptidase m16 | BKM63_00090 | Not Available | Negative | 30005 - 32824 | 107113.0 |
| hypothetical protein | BKM63_00095 | Not Available | Negative | 32898 - 34280 | 52462.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
