Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiha family ribosome biogenesis gtp-binding protein | BKM63_09965 | Not Available | Negative | 2244436 - 2245068 | 24061.8 |
| alpha/beta hydrolase | BKM63_09970 | Not Available | Negative | 2245111 - 2245875 | 28646.7 |
| division/cell wall cluster transcriptional repressor mraz | BKM63_09975 | Not Available | Positive | 2246254 - 2246727 | 17704.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | BKM63_09980 | Not Available | Positive | 2246714 - 2247610 | 34461.3 |
| s-adenosyl-methyltransferase | BKM63_09985 | Not Available | Positive | 2247627 - 2247974 | 13700.0 |
| penicillin-binding protein | BKM63_09990 | Not Available | Positive | 2247965 - 2249971 | 74442.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BKM63_09995 | Not Available | Positive | 2249968 - 2251431 | 54244.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BKM63_10000 | Not Available | Positive | 2251510 - 2252742 | 45308.3 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | BKM63_10005 | Not Available | Positive | 2252743 - 2254074 | 49380.2 |
| cell division protein ftsw | BKM63_10010 | Not Available | Positive | 2254153 - 2255472 | 49114.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
