Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-pyrroline-5-carboxylate dehydrogenase | BKM63_09760 | Not Available | Negative | 2201065 - 2202690 | 59635.9 |
| dna ligase-associated dexh box helicase | BKM63_09765 | Not Available | Positive | 2202884 - 2203939 | 39940.4 |
| atp-dependent dna ligase | BKM63_09770 | Not Available | Positive | 2204089 - 2205690 | 62068.2 |
| dna ligase-associated dexh box helicase | BKM63_09775 | Not Available | Positive | 2205788 - 2208247 | 93862.6 |
| metallophosphoesterase | BKM63_09780 | Not Available | Positive | 2208255 - 2208890 | 24616.7 |
| co2+/mg2+ efflux protein apag | BKM63_09785 | Not Available | Negative | 2208887 - 2209273 | 14404.4 |
| duf5103 domain-containing protein | BKM63_09790 | Not Available | Negative | 2209353 - 2210612 | 48605.7 |
| serine/threonine protein kinase | BKM63_09795 | Not Available | Negative | 2210698 - 2213598 | 111326.0 |
| sam-dependent methyltransferase | BKM63_09800 | Not Available | Negative | 2213716 - 2214489 | 29997.3 |
| gxxexxy protein | BKM63_09805 | Not Available | Negative | 2214530 - 2214934 | 15413.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
