Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | BKM63_09610 | Not Available | Positive | 2171006 - 2173612 | 97854.1 |
| Trna-gly | Not Available | Not Available | Positive | 2173774 - 2173849 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2173861 - 2173949 | Not Available |
| duf1508 domain-containing protein | BKM63_09625 | Not Available | Positive | 2174119 - 2174499 | 14781.6 |
| hypothetical protein | BKM63_09630 | Not Available | Negative | 2174621 - 2174845 | 7281.66 |
| 3-deoxy-d-manno-octulosonic acid transferase | BKM63_09635 | Not Available | Negative | 2175191 - 2176420 | 46663.3 |
| transcriptional regulator | BKM63_09640 | Not Available | Positive | 2176555 - 2177688 | 41803.3 |
| udp-glucose 4-epimerase gale | BKM63_09645 | Not Available | Positive | 2177730 - 2178743 | 37024.2 |
| [acyl-carrier-protein] s-malonyltransferase | BKM63_09650 | Not Available | Negative | 2178873 - 2179748 | 30715.2 |
| duf983 domain-containing protein | BKM63_09655 | Not Available | Negative | 2179821 - 2180183 | 13974.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
