Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease atp-binding subunit clpx | BKM63_09510 | Not Available | Positive | 2148519 - 2149751 | 45570.4 |
| hypothetical protein | BKM63_09515 | Not Available | Negative | 2149835 - 2150308 | 18052.3 |
| arac family transcriptional regulator | BKM63_09520 | Not Available | Negative | 2150358 - 2151323 | 36709.6 |
| extradiol dioxygenase | BKM63_09525 | Not Available | Positive | 2151466 - 2151876 | 15775.8 |
| polyketide cyclase | BKM63_09530 | Not Available | Positive | 2151925 - 2152329 | 15272.6 |
| extradiol dioxygenase | BKM63_09535 | Not Available | Positive | 2152447 - 2152854 | 15098.8 |
| atpase | BKM63_09540 | Not Available | Positive | 2152857 - 2153294 | 17068.2 |
| voc family protein | BKM63_09545 | Not Available | Positive | 2153353 - 2153790 | 16003.6 |
| phosphoserine phosphatase serb | BKM63_09550 | Not Available | Positive | 2154028 - 2155257 | 45156.7 |
| redox-active disulfide protein 2 | BKM63_09555 | Not Available | Negative | 2155456 - 2155695 | 9076.61 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
