Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_09100 | Not Available | Positive | 2049608 - 2049790 | 6346.0 |
| phosphoesterase | BKM63_09105 | Not Available | Positive | 2049960 - 2051195 | 47732.9 |
| thiol reductase thioredoxin | BKM63_09110 | Not Available | Positive | 2051267 - 2051569 | 11203.6 |
| polysaccharide deacetylase family protein | BKM63_09115 | Not Available | Negative | 2051602 - 2052240 | 24638.8 |
| hypothetical protein | BKM63_09120 | Not Available | Negative | 2052337 - 2055618 | 125996.0 |
| Trna-gln | Not Available | Not Available | Positive | 2055864 - 2055934 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2056046 - 2056116 | Not Available |
| universal stress protein uspa | BKM63_09135 | Not Available | Negative | 2056196 - 2057020 | 30374.7 |
| ribosome assembly cofactor rimp | BKM63_09140 | Not Available | Positive | 2057193 - 2057657 | 17212.6 |
| transcription termination/antitermination protein nusa | BKM63_09145 | Not Available | Positive | 2057671 - 2058921 | 47449.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
