Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | BKM63_09050 | Not Available | Negative | 2039593 - 2040048 | 16553.3 |
| hypothetical protein | BKM63_09055 | Not Available | Negative | 2040243 - 2041055 | 28560.7 |
| hypothetical protein | BKM63_09060 | Not Available | Negative | 2041081 - 2041827 | 26610.3 |
| laci family transcriptional regulator | BKM63_09065 | Not Available | Positive | 2042024 - 2043049 | 37628.3 |
| hypothetical protein | BKM63_09070 | Not Available | Negative | 2043093 - 2043554 | 17429.0 |
| dna polymerase i | BKM63_09075 | Not Available | Negative | 2043675 - 2046527 | 107323.0 |
| hypothetical protein | BKM63_09080 | Not Available | Positive | 2046852 - 2047049 | 7020.69 |
| hypothetical protein | BKM63_09085 | Not Available | Positive | 2047112 - 2047297 | 6389.91 |
| dna-binding response regulator | BKM63_09090 | Not Available | Positive | 2047485 - 2048159 | 25661.9 |
| two-component sensor histidine kinase | BKM63_09095 | Not Available | Positive | 2048242 - 2049507 | 48746.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
