Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | BKM63_08950 | Not Available | Negative | 2021476 - 2022630 | 44209.6 |
| flavin reductase | BKM63_08955 | Not Available | Positive | 2022793 - 2023668 | 32043.5 |
| hypothetical protein | BKM63_08960 | Not Available | Positive | 2023700 - 2024071 | 13850.2 |
| leucyl/phenylalanyl-trna--protein transferase | BKM63_08965 | Not Available | Positive | 2024314 - 2024952 | 24262.1 |
| sulfurase | BKM63_08970 | Not Available | Positive | 2024954 - 2025748 | 30297.3 |
| thiamine biosynthesis protein thif | BKM63_08975 | Not Available | Negative | 2025745 - 2026455 | 26389.3 |
| thiamine biosynthesis protein thih | BKM63_08980 | Not Available | Negative | 2026503 - 2027630 | 43675.9 |
| thiazole synthase | BKM63_08985 | Not Available | Negative | 2027726 - 2028502 | 27620.3 |
| thiamine-phosphate diphosphorylase | BKM63_08990 | Not Available | Negative | 2028483 - 2029121 | 23685.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | BKM63_08995 | Not Available | Negative | 2029114 - 2029863 | 27980.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
