Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosylceramidase | BKM63_08800 | Not Available | Positive | 1991262 - 1992719 | 52929.3 |
| glycosyl hydrolase family 5 | BKM63_08805 | Not Available | Positive | 1992744 - 1994501 | 66552.0 |
| endonuclease/exonuclease/phosphatase | BKM63_08810 | Not Available | Positive | 1994680 - 1995519 | 31782.1 |
| glucosylceramidase | BKM63_08815 | Not Available | Positive | 1995523 - 1996947 | 52286.2 |
| glycosyl hydrolase | BKM63_08820 | Not Available | Positive | 1996961 - 1999192 | 82307.5 |
| hypothetical protein | BKM63_08825 | Not Available | Negative | 1999244 - 2001265 | 79450.5 |
| hypothetical protein | BKM63_08830 | Not Available | Negative | 2001484 - 2001741 | 9911.05 |
| nudix hydrolase | BKM63_08835 | Not Available | Positive | 2002045 - 2002800 | 29331.7 |
| hypothetical protein | BKM63_08840 | Not Available | Positive | 2002829 - 2003152 | 12506.1 |
| alpha-ketoglutarate-dependent dioxygenase alkb | BKM63_08845 | Not Available | Negative | 2003154 - 2003762 | 23318.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
