Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | BKM63_08750 | Not Available | Negative | 1971051 - 1971533 | 17680.2 |
| hypothetical protein | BKM63_08755 | Not Available | Negative | 1971609 - 1972817 | 44251.7 |
| peptidase c25 | BKM63_08760 | Not Available | Negative | 1972860 - 1976699 | 142829.0 |
| gliding motility lipoprotein gldj | BKM63_08765 | Not Available | Positive | 1976913 - 1978598 | 63197.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BKM63_08770 | Not Available | Positive | 1978716 - 1980002 | 48365.1 |
| regulator | BKM63_08775 | Not Available | Negative | 1980033 - 1982903 | 110764.0 |
| susc/raga family tonb-linked outer membrane protein | BKM63_08780 | Not Available | Positive | 1983250 - 1986366 | 113065.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_08785 | Not Available | Positive | 1986382 - 1987896 | 55244.1 |
| glycosyl hydrolase | BKM63_08790 | Not Available | Positive | 1988226 - 1989680 | 54513.7 |
| glycosyl hydrolase | BKM63_08795 | Not Available | Positive | 1989768 - 1991237 | 55355.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
