Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m16 | BKM63_08695 | Not Available | Negative | 1956999 - 1958321 | 50340.1 |
| 50s ribosomal protein l21 | BKM63_08700 | Not Available | Positive | 1958596 - 1959033 | 15713.1 |
| 50s ribosomal protein l27 | BKM63_08705 | Not Available | Positive | 1959058 - 1959318 | 9418.32 |
| hypothetical protein | BKM63_08710 | Not Available | Positive | 1959474 - 1960739 | 48877.5 |
| hypothetical protein | BKM63_08720 | Not Available | Negative | 1961374 - 1964130 | 102770.0 |
| trna 2-methylthio-n6-isopentenyl adenosine(37) hydroxylase miae | BKM63_08725 | Not Available | Negative | 1964182 - 1964763 | 22696.2 |
| glycosyltransferase | BKM63_08730 | Not Available | Positive | 1964878 - 1966122 | 47656.4 |
| aminopeptidase | BKM63_08735 | Not Available | Negative | 1966252 - 1968099 | 69459.9 |
| pyruvate dehydrogenase | BKM63_08740 | Not Available | Negative | 1968224 - 1969888 | 57791.0 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | BKM63_08745 | Not Available | Negative | 1969895 - 1970893 | 37591.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
