Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | BKM63_08645 | Not Available | Positive | 1944812 - 1947187 | 90711.7 |
| ribonuclease e/g | BKM63_08650 | Not Available | Negative | 1947562 - 1949106 | 58512.8 |
| integration host factor subunit beta | BKM63_08655 | Not Available | Negative | 1949489 - 1949779 | 10527.7 |
| a/g-specific adenine glycosylase | BKM63_08660 | Not Available | Positive | 1949920 - 1950966 | 40177.6 |
| single-stranded dna-binding protein | BKM63_08665 | Not Available | Positive | 1951003 - 1951443 | 16692.6 |
| magnesium/cobalt efflux protein | BKM63_08670 | Not Available | Positive | 1951467 - 1952762 | 48452.6 |
| gliding motility lipoprotein gldd | BKM63_08675 | Not Available | Positive | 1952763 - 1953323 | 21434.0 |
| heavy metal transporter | BKM63_08680 | Not Available | Negative | 1953393 - 1953770 | 13568.3 |
| permease | BKM63_08685 | Not Available | Positive | 1953875 - 1954741 | 31655.0 |
| peptidase m16 | BKM63_08690 | Not Available | Negative | 1954937 - 1956985 | 75678.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
