Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate c-acetyltransferase | BKM63_08595 | Not Available | Positive | 1928217 - 1930451 | 83423.9 |
| pyruvate formate-lyase 1-activating enzyme | BKM63_08600 | Not Available | Positive | 1930526 - 1931308 | 29928.9 |
| dgtpase | BKM63_08605 | Not Available | Positive | 1931469 - 1932815 | 50610.6 |
| hypothetical protein | BKM63_08610 | Not Available | Negative | 1932890 - 1933891 | 37751.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BKM63_08615 | Not Available | Negative | 1933925 - 1935712 | 65150.4 |
| hypothetical protein | BKM63_08620 | Not Available | Negative | 1935765 - 1936409 | 24276.4 |
| cell filamentation protein fic | BKM63_08625 | Not Available | Positive | 1936552 - 1937670 | 42814.8 |
| pp_01697 | BKM63_08630 | Not Available | Positive | 1937741 - 1938184 | Not Available |
| hypothetical protein | BKM63_08635 | Not Available | Positive | 1938196 - 1938828 | 24576.8 |
| hypothetical protein | BKM63_08640 | Not Available | Positive | 1939027 - 1944699 | 210453.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
