Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_00785 | Not Available | Negative | 175626 - 176663 | 37588.7 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_00790 | Not Available | Negative | 176683 - 178281 | 58546.8 |
| susc/raga family protein | BKM63_00795 | Not Available | Negative | 178294 - 181485 | 115630.0 |
| arac family transcriptional regulator | BKM63_00800 | Not Available | Negative | 181798 - 182676 | 34166.0 |
| beta-mannosidase | BKM63_00805 | Not Available | Positive | 182981 - 184114 | 43608.1 |
| mfs transporter | BKM63_00810 | Not Available | Positive | 184158 - 185549 | 52010.7 |
| glycosidase | BKM63_00815 | Not Available | Positive | 185579 - 186769 | 44073.1 |
| n-acyl-d-glucosamine 2-epimerase | BKM63_00820 | Not Available | Positive | 186776 - 187966 | 46525.8 |
| beta-mannosidase | BKM63_00825 | Not Available | Positive | 187972 - 189201 | 45779.7 |
| beta-mannanase | BKM63_00830 | Not Available | Positive | 189343 - 190620 | 48500.4 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
