Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'/3'-nucleotidase sure | BKM63_08140 | Not Available | Negative | 1816837 - 1817616 | 28612.3 |
| tail-specific protease | BKM63_08145 | Not Available | Positive | 1817829 - 1820012 | 83194.2 |
| endonuclease | BKM63_08150 | Not Available | Positive | 1820101 - 1820886 | 30101.2 |
| ribulose-phosphate 3-epimerase | BKM63_08155 | Not Available | Negative | 1820863 - 1821525 | 24095.2 |
| rna polymerase subunit sigma | BKM63_08160 | Not Available | Negative | 1821936 - 1822799 | 32917.6 |
| hypothetical protein | BKM63_08165 | Not Available | Negative | 1822990 - 1824738 | 66717.1 |
| hypothetical protein | BKM63_08170 | Not Available | Negative | 1824789 - 1826015 | 46376.6 |
| tonb-dependent receptor | BKM63_08175 | Not Available | Negative | 1826020 - 1828803 | 105446.0 |
| hypothetical protein | BKM63_08180 | Not Available | Negative | 1828804 - 1829451 | 25638.5 |
| hypothetical protein | BKM63_08185 | Not Available | Negative | 1829785 - 1830036 | 9559.02 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
