Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-phosphoglucomutase | BKM63_07985 | Not Available | Negative | 1778876 - 1779532 | 24250.0 |
| mfs transporter | BKM63_07990 | Not Available | Negative | 1779551 - 1780906 | 49798.6 |
| laci family transcriptional regulator | BKM63_07995 | Not Available | Negative | 1781085 - 1782116 | 38351.0 |
| susc/raga family tonb-linked outer membrane protein | BKM63_08000 | Not Available | Positive | 1782352 - 1785333 | 109410.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_08005 | Not Available | Positive | 1785371 - 1787212 | 67421.9 |
| duf5116 domain-containing protein | BKM63_08010 | Not Available | Positive | 1787234 - 1788334 | 39570.3 |
| alpha-amylase | BKM63_08015 | Not Available | Positive | 1788417 - 1791287 | 105949.0 |
| hypothetical protein | BKM63_08020 | Not Available | Negative | 1791403 - 1791630 | 8326.5 |
| mfs transporter | BKM63_08025 | Not Available | Negative | 1791642 - 1793138 | 55387.0 |
| hypothetical protein | BKM63_08030 | Not Available | Positive | 1793909 - 1795228 | 47165.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
