Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(46)-n7)-methyltransferase trmb | BKM63_07635 | Not Available | Negative | 1706694 - 1707371 | 26206.4 |
| ammonia channel protein | BKM63_07640 | Not Available | Negative | 1707546 - 1708928 | 49870.3 |
| hypothetical protein | BKM63_07645 | Not Available | Negative | 1709191 - 1709679 | 18538.4 |
| hypothetical protein | BKM63_07650 | Not Available | Positive | 1709933 - 1710607 | 23075.2 |
| nad(p)h:quinone oxidoreductase, type iv | BKM63_07655 | Not Available | Negative | 1710666 - 1711826 | 40981.5 |
| hypothetical protein | BKM63_07660 | Not Available | Negative | 1711823 - 1712014 | 7379.83 |
| ribosomal subunit interface protein | BKM63_07665 | Not Available | Negative | 1712497 - 1712811 | 11963.3 |
| hypothetical protein | BKM63_07670 | Not Available | Negative | 1713042 - 1715504 | 92472.0 |
| thioredoxin | BKM63_07675 | Not Available | Positive | 1715749 - 1716066 | 11303.6 |
| hypothetical protein | BKM63_07680 | Not Available | Negative | 1716300 - 1718393 | 80588.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
