Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_07535 | Not Available | Negative | 1686216 - 1686569 | 13548.0 |
| hypothetical protein | BKM63_07540 | Not Available | Positive | 1686792 - 1687499 | 27173.2 |
| hypothetical protein | BKM63_07545 | Not Available | Negative | 1687494 - 1688099 | 23140.8 |
| hypothetical protein | BKM63_07550 | Not Available | Positive | 1688136 - 1688366 | 8859.24 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | BKM63_07555 | Not Available | Positive | 1688528 - 1690996 | 92347.7 |
| mechanosensitive ion channel protein mscl | BKM63_07560 | Not Available | Positive | 1691066 - 1691449 | 13743.1 |
| aspartate-semialdehyde dehydrogenase | BKM63_07565 | Not Available | Positive | 1691625 - 1692614 | 36184.5 |
| smi1/knr4 family protein | BKM63_07570 | Not Available | Positive | 1692736 - 1693239 | 19600.2 |
| ferredoxin | BKM63_07575 | Not Available | Negative | 1693332 - 1693649 | 11597.1 |
| hypothetical protein | BKM63_07580 | Not Available | Negative | 1693711 - 1694190 | 18114.4 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
