Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_00685 | Not Available | Negative | 152826 - 153686 | 32541.8 |
| hypothetical protein | BKM63_00690 | Not Available | Negative | 153841 - 154893 | 41794.6 |
| abc transporter atp-binding protein | BKM63_00695 | Not Available | Positive | 155001 - 155909 | 33512.6 |
| abc transporter permease | BKM63_00700 | Not Available | Positive | 155917 - 156753 | 32197.4 |
| hypothetical protein | BKM63_00705 | Not Available | Positive | 156769 - 159108 | 85275.1 |
| gtp-binding protein typa | BKM63_00710 | Not Available | Negative | 159187 - 160983 | 67132.0 |
| pas domain-containing sensor histidine kinase | BKM63_00715 | Not Available | Positive | 161152 - 162861 | 66430.1 |
| response regulator | BKM63_00720 | Not Available | Positive | 162866 - 163279 | 15727.2 |
| 30s ribosomal protein s20 | BKM63_00725 | Not Available | Negative | 163419 - 163670 | 9430.69 |
| Trna-glu | Not Available | Not Available | Positive | 163820 - 163894 | Not Available |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
