Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_07435 | Not Available | Positive | 1659183 - 1659374 | 6460.81 |
| abc transporter atp-binding protein | BKM63_07440 | Not Available | Positive | 1659596 - 1661788 | 82839.2 |
| hlyd family secretion protein | BKM63_07445 | Not Available | Positive | 1661791 - 1663086 | 49127.5 |
| hypothetical protein | BKM63_07450 | Not Available | Positive | 1663242 - 1663421 | 6403.67 |
| trna (adenine-n(6)-)-methyltransferase | BKM63_07455 | Not Available | Negative | 1663464 - 1664171 | 26906.7 |
| 16s rrna processing protein rimm | BKM63_07460 | Not Available | Negative | 1664250 - 1664774 | 20106.3 |
| 30s ribosomal protein s16 | BKM63_07465 | Not Available | Negative | 1664790 - 1665356 | 20067.6 |
| hypothetical protein | BKM63_07470 | Not Available | Positive | 1665544 - 1666035 | 18271.2 |
| rna-binding protein | BKM63_07475 | Not Available | Positive | 1666161 - 1666511 | 12482.3 |
| 3-isopropylmalate dehydrogenase | BKM63_07480 | Not Available | Negative | 1666664 - 1667725 | 38545.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
