Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | BKM63_07135 | Not Available | Negative | 1587597 - 1588628 | 38380.9 |
| nadh oxidoreductase (quinone) subunit f | BKM63_07140 | Not Available | Negative | 1588711 - 1590078 | 50201.0 |
| nad(p)h-dependent oxidoreductase subunit e | BKM63_07145 | Not Available | Negative | 1590080 - 1590610 | 20244.6 |
| nadh dehydrogenase | BKM63_07150 | Not Available | Negative | 1590810 - 1592048 | 47154.5 |
| nadh dehydrogenase | BKM63_07155 | Not Available | Negative | 1592074 - 1592595 | 20630.4 |
| nadh dehydrogenase | BKM63_07160 | Not Available | Negative | 1592597 - 1593145 | 19916.1 |
| nadh-quinone oxidoreductase subunit a | BKM63_07165 | Not Available | Negative | 1593304 - 1593669 | 13816.4 |
| cold-shock protein | BKM63_07170 | Not Available | Negative | 1593911 - 1594105 | 7098.27 |
| aspartate--trna ligase | BKM63_07175 | Not Available | Negative | 1594411 - 1596162 | 66171.0 |
| thioredoxin | BKM63_07180 | Not Available | Positive | 1596319 - 1597314 | 37587.7 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
