Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | BKM63_06985 | Not Available | Negative | 1554532 - 1555914 | 51708.0 |
| hypothetical protein | BKM63_06990 | Not Available | Negative | 1556022 - 1557104 | 39339.4 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_06995 | Not Available | Negative | 1557119 - 1558627 | 56338.4 |
| susc/raga family tonb-linked outer membrane protein | BKM63_07000 | Not Available | Negative | 1558636 - 1561908 | 119536.0 |
| iron dicitrate transport regulator fecr | BKM63_07005 | Not Available | Negative | 1562040 - 1563218 | 44404.7 |
| rna polymerase sigma-70 factor | BKM63_07010 | Not Available | Negative | 1563515 - 1564078 | 22049.5 |
| aspartate kinase | BKM63_07015 | Not Available | Negative | 1564476 - 1565132 | 24599.9 |
| yran family protein | BKM63_07020 | Not Available | Negative | 1565252 - 1565623 | 14320.9 |
| ld-carboxypeptidase | BKM63_07025 | Not Available | Negative | 1565800 - 1566699 | 33017.2 |
| endonuclease | BKM63_07030 | Not Available | Positive | 1566908 - 1568005 | 42015.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
