Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpp family protein | BKM63_00635 | Not Available | Positive | 140577 - 141176 | 21953.3 |
| hypothetical protein | BKM63_00640 | Not Available | Positive | 141342 - 141884 | 20943.7 |
| four helix bundle protein | BKM63_00645 | Not Available | Positive | 141963 - 142322 | 13958.8 |
| nucleoid-associated protein ndpa | BKM63_00650 | Not Available | Positive | 142366 - 143424 | 41681.0 |
| tetr family transcriptional regulator | BKM63_00655 | Not Available | Negative | 143516 - 144097 | 22123.3 |
| short-chain dehydrogenase | BKM63_00660 | Not Available | Negative | 144170 - 144922 | 26350.7 |
| gaf domain-containing protein | BKM63_00665 | Not Available | Positive | 145153 - 147522 | 92608.4 |
| hypothetical protein | BKM63_00670 | Not Available | Negative | 147519 - 147716 | 7617.35 |
| phosphohydrolase | BKM63_00675 | Not Available | Negative | 147697 - 148875 | 45324.2 |
| metallophosphoesterase | BKM63_00680 | Not Available | Positive | 148902 - 152648 | 142363.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
