Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin of toxin-antitoxin system | BKM63_06885 | Not Available | Negative | 1524928 - 1525200 | 10775.2 |
| hypothetical protein | BKM63_06890 | Not Available | Negative | 1525191 - 1525388 | 7613.3 |
| fe-s cluster assembly protein sufb | BKM63_06895 | Not Available | Negative | 1525405 - 1526853 | 53964.9 |
| [fe-s]-binding protein | BKM63_06900 | Not Available | Negative | 1526931 - 1527260 | 11749.9 |
| hypothetical protein | BKM63_06905 | Not Available | Positive | 1527637 - 1528563 | 34956.2 |
| mbl fold metallo-hydrolase | BKM63_06910 | Not Available | Positive | 1528793 - 1529650 | 32836.9 |
| hypothetical protein | BKM63_06915 | Not Available | Negative | 1529729 - 1533559 | 140647.0 |
| peptidase s8 | BKM63_06920 | Not Available | Positive | 1533833 - 1535467 | 59616.6 |
| peptidase m1 | BKM63_06925 | Not Available | Positive | 1535530 - 1537410 | 71509.2 |
| nad-dependent epimerase | BKM63_06930 | Not Available | Negative | 1537483 - 1538421 | 35312.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
