Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | BKM63_06630 | Not Available | Positive | 1473013 - 1473624 | 21928.9 |
| aminoacyl-trna hydrolase | BKM63_06635 | Not Available | Positive | 1473819 - 1474445 | 23692.6 |
| superoxide dismutase | BKM63_06640 | Not Available | Positive | 1474585 - 1475196 | 22421.4 |
| amidophosphoribosyltransferase | BKM63_06645 | Not Available | Negative | 1475665 - 1477563 | 71836.3 |
| sugar kinase | BKM63_06650 | Not Available | Negative | 1477648 - 1478571 | 33809.6 |
| hypothetical protein | BKM63_06655 | Not Available | Negative | 1478780 - 1478962 | 7111.97 |
| hypothetical protein | BKM63_06660 | Not Available | Negative | 1479203 - 1479598 | 15091.8 |
| rna polymerase | BKM63_06665 | Not Available | Negative | 1479582 - 1480169 | 22825.3 |
| hypothetical protein | BKM63_06670 | Not Available | Positive | 1480440 - 1480787 | 12762.1 |
| ribonuclease hi | BKM63_06675 | Not Available | Negative | 1480847 - 1481323 | 18227.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
