Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | BKM63_06330 | Not Available | Positive | 1411476 - 1412492 | 36750.2 |
| cytochrome c biosynthesis protein | BKM63_06335 | Not Available | Positive | 1412535 - 1413884 | 51742.4 |
| hypothetical protein | BKM63_06340 | Not Available | Positive | 1413894 - 1414673 | 29614.3 |
| peptidase m23 | BKM63_06345 | Not Available | Positive | 1414699 - 1415976 | 48516.7 |
| ribosome-binding factor a | BKM63_06350 | Not Available | Positive | 1416073 - 1416465 | 14875.0 |
| hypothetical protein | BKM63_06355 | Not Available | Positive | 1416467 - 1417666 | 44717.6 |
| mate family efflux transporter | BKM63_06360 | Not Available | Positive | 1417836 - 1419263 | 51419.4 |
| trna dihydrouridine synthase dusb | BKM63_06365 | Not Available | Negative | 1419339 - 1420331 | 37470.5 |
| phenylacetate--coa ligase | BKM63_06370 | Not Available | Negative | 1420556 - 1421842 | 48205.1 |
| acyl-coa--6-aminopenicillanic acid acyl-transferase | BKM63_06375 | Not Available | Negative | 1421839 - 1423506 | 63718.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
