Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | BKM63_06025 | Not Available | Negative | 1345088 - 1347367 | 88028.0 |
| hypothetical protein | BKM63_06030 | Not Available | Negative | 1347473 - 1348048 | 21318.3 |
| methyltransferase | BKM63_06035 | Not Available | Negative | 1348682 - 1349530 | 32729.3 |
| hypothetical protein | BKM63_06040 | Not Available | Negative | 1349625 - 1350086 | 18237.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | BKM63_06045 | Not Available | Negative | 1350296 - 1352167 | 69811.8 |
| rrna maturation rnase ybey | BKM63_06050 | Not Available | Negative | 1352599 - 1353018 | 16238.7 |
| hypothetical protein | BKM63_06055 | Not Available | Negative | 1353015 - 1356413 | 128836.0 |
| glutamate--trna ligase | BKM63_06060 | Not Available | Positive | 1356579 - 1358084 | 57327.3 |
| spfh domain-containing protein | BKM63_06065 | Not Available | Positive | 1358218 - 1359201 | 36769.3 |
| hypothetical protein | BKM63_06070 | Not Available | Negative | 1359221 - 1359475 | 9909.97 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
