Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta' | BKM63_05975 | Not Available | Positive | 1335211 - 1336359 | 43610.3 |
| doxx family protein | BKM63_05980 | Not Available | Positive | 1336367 - 1336750 | 14347.0 |
| acyl-coa thioesterase | BKM63_05985 | Not Available | Positive | 1336869 - 1337378 | 18654.5 |
| recombinase reca | BKM63_05990 | Not Available | Positive | 1337538 - 1338545 | 36206.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | BKM63_05995 | Not Available | Negative | 1339111 - 1339866 | 29397.9 |
| tryptophan--trna ligase | BKM63_06000 | Not Available | Positive | 1340061 - 1341035 | 36024.1 |
| dna protecting protein dpra | BKM63_06005 | Not Available | Negative | 1341323 - 1342423 | 41072.9 |
| sporulation protein | BKM63_06010 | Not Available | Positive | 1342662 - 1343624 | 35672.6 |
| hypothetical protein | BKM63_06015 | Not Available | Positive | 1343749 - 1344198 | 17512.4 |
| hypothetical protein | BKM63_06020 | Not Available | Negative | 1344234 - 1345055 | 31483.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
