Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | BKM63_05765 | Not Available | Negative | 1270869 - 1271882 | 38653.7 |
| arac family transcriptional regulator | BKM63_05770 | Not Available | Negative | 1272063 - 1272935 | 33140.9 |
| glutamyl-trna reductase | BKM63_05775 | Not Available | Positive | 1273164 - 1274414 | 46816.3 |
| hydroxymethylbilane synthase | BKM63_05780 | Not Available | Positive | 1274520 - 1275446 | 34264.2 |
| uroporphyrinogen iii synthase | BKM63_05785 | Not Available | Positive | 1275446 - 1276120 | 25100.1 |
| uroporphyrinogen decarboxylase | BKM63_05790 | Not Available | Positive | 1276209 - 1277234 | 37959.4 |
| hypothetical protein | BKM63_05795 | Not Available | Positive | 1277312 - 1277674 | 14513.8 |
| hypothetical protein | BKM63_05800 | Not Available | Positive | 1277692 - 1278069 | 14607.5 |
| gnat family n-acetyltransferase | BKM63_05805 | Not Available | Positive | 1278073 - 1278618 | 21092.1 |
| coproporphyrinogen iii oxidase | BKM63_05810 | Not Available | Positive | 1278615 - 1279517 | 34906.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
